Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3397
Parameters: 2 7 7 80 10 50 1000
Length:  42000

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5203--5274
26
2.8
26
87
10
96
23
22
22
31
1.98
5228--5287
26
2.4
26
79
20
74
28
18
21
31
1.97
5492--5574
31
2.7
31
87
3
116
32
15
26
25
1.96
13121--13192
26
2.8
26
85
6
94
26
20
22
30
1.98
13145--13205
25
2.4
26
76
15
65
31
16
22
29
1.96
18946--19305
94
3.8
94
74
13
287
27
20
29
23
1.98
18949--19309
47
7.7
46
69
11
207
27
19
29
22
1.98
30205--30485
137
2.0
138
92
0
465
44
6
9
40
1.61
33746--33836
25
3.6
25
77
0
101
30
21
20
26
1.98
36320--36398
29
2.7
29
90
0
122
21
13
25
39
1.90

Tables:   1

The End!