Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1909
Parameters: 2 7 7 80 10 50 1000
Length:  46261

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
982--1024
1
43.0
1
100
0
86
100
0
0
0
0.00
8740--8847
54
2.0
54
85
3
146
42
10
7
39
1.67
10623--10656
17
2.0
17
88
11
52
55
0
0
44
0.99
17703--18049
120
2.9
120
97
1
644
44
2
6
46
1.42
18197--18287
45
2.0
45
85
2
121
37
28
6
27
1.82
18268--18336
16
4.2
16
92
3
120
36
37
1
24
1.65
18268--18336
33
2.1
32
94
2
120
36
37
1
24
1.65
23528--23571
22
1.9
22
86
9
61
29
11
4
54
1.56
26062--26143
31
2.5
32
81
16
98
32
0
17
50
1.46
30904--30946
22
2.0
22
90
0
68
9
18
27
44
1.80
31086--31182
42
2.3
43
81
1
106
24
24
28
21
1.99
31210--31462
86
2.9
86
83
2
267
28
31
16
23
1.97
31223--31481
43
6.0
43
74
2
198
30
30
16
23
1.96
31789--31848
21
2.9
21
76
0
57
3
41
18
36
1.67
31830--31995
66
2.5
66
85
3
210
13
28
18
40
1.88
37381--37742
9
43.0
9
66
17
161
31
2
19
46
1.64
37403--37682
16
17.8
16
66
18
90
32
2
18
45
1.63
37441--37669
25
9.1
25
75
9
180
34
2
19
44
1.65
37461--37700
50
4.9
50
71
15
162
33
2
18
45
1.65
37439--37626
75
2.5
74
93
3
297
34
2
17
45
1.63
37498--37742
25
9.7
25
69
11
76
32
2
18
46
1.64
37799--37854
27
2.1
27
96
0
103
46
3
7
42
1.48
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
38668--38701
8
4.4
8
96
3
61
23
0
0
76
0.79
39306--39406
14
6.9
14
81
6
94
29
44
0
24
1.60
39352--39406
7
7.7
7
87
4
74
30
49
0
20
1.49
39352--39407
22
2.6
21
91
2
85
32
48
0
19
1.49
39358--39424
29
2.3
29
84
0
80
31
47
0
20
1.51
39355--39424
22
3.2
22
84
6
63
32
47
0
20
1.50
40099--40141
19
2.3
19
91
0
68
13
2
2
81
0.89
41452--41731
41
6.8
41
88
3
375
32
26
22
18
1.97
41786--41904
40
3.0
40
79
2
134
22
17
21
37
1.94
43593--43765
75
2.3
73
77
4
184
27
23
20
28
1.99
43629--43761
40
3.5
39
70
19
109
28
22
19
29
1.98

Tables:   1

The End!