Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold315
Parameters: 2 7 7 80 10 50 1000
Length:  43591

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1814--2089
40
7.2
40
79
13
239
23
22
28
25
1.99
1855--2064
36
5.6
38
87
11
265
23
22
28
24
1.99
1814--2066
73
3.3
78
81
12
310
23
22
28
24
1.99
9901--10227
40
8.2
39
89
3
374
22
24
28
25
2.00
9901--10202
80
3.8
80
87
3
414
22
24
28
24
2.00
18540--18618
37
2.1
37
90
0
122
25
31
18
24
1.98
18737--19397
47
14.1
47
92
0
1063
28
29
8
33
1.87
22820--23178
48
7.7
46
73
7
251
25
27
19
27
1.99
22867--23231
138
2.6
140
78
7
357
26
27
19
26
1.99
22975--23178
91
2.2
92
82
3
239
25
29
18
26
1.98
27827--27972
75
1.9
75
94
0
256
28
26
19
24
1.99
29675--29956
48
5.8
48
74
10
209
23
28
21
26
1.99
29767--29897
52
2.6
52
83
7
146
22
29
22
25
1.99

Tables:   1

The End!