Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1545
Parameters: 2 7 7 80 10 50 1000
Length:  42980

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1265--1316
26
2.0
26
85
14
72
26
28
13
30
1.94
3017--3219
44
4.7
42
73
18
159
28
27
22
22
1.99
5601--5650
14
3.4
15
76
13
50
60
12
16
12
1.60
8583--8747
46
3.6
46
74
11
156
29
27
20
23
1.98
8582--8753
93
1.8
93
87
0
254
29
27
20
22
1.98
8676--8761
46
1.9
46
85
4
122
31
26
18
23
1.97
11179--11394
40
5.4
40
87
3
278
25
27
22
25
2.00
17164--17263
42
2.3
43
83
6
123
31
23
18
28
1.97
33936--34113
27
6.6
27
83
3
205
26
15
28
29
1.96
33937--34092
82
1.9
81
88
3
233
26
15
28
29
1.96
33933--34113
82
2.2
81
83
2
229
27
15
27
29
1.96
34018--34124
27
3.9
27
85
1
70
26
14
28
30
1.95
42043--42220
27
6.6
27
83
3
205
26
15
28
29
1.96
42044--42199
82
1.9
81
88
3
233
26
15
28
29
1.96
42040--42220
82
2.2
81
83
2
229
27
15
27
29
1.96
42125--42231
27
3.9
27
85
1
70
26
14
28
30
1.95

Tables:   1

The End!