Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3690
Parameters: 2 7 7 80 10 50 1000
Length:  57444

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3609--3821
113
1.9
116
84
7
292
25
20
28
25
1.99
3616--3821
39
5.4
38
84
10
244
25
20
28
25
1.99
11573--11720
40
3.7
39
85
7
208
25
20
27
26
1.99
11581--11753
79
2.2
79
80
10
192
27
20
26
26
1.99
15267--15482
50
4.3
50
80
2
254
40
18
11
29
1.86
15267--15482
100
2.2
100
82
2
281
40
18
11
29
1.86
22204--22289
31
2.8
31
83
1
120
25
24
16
33
1.95
22434--22541
25
4.4
25
90
3
130
25
23
23
27
2.00
22447--22541
25
3.8
25
94
0
163
26
23
25
25
2.00
22589--22627
11
3.7
11
80
13
55
30
17
12
38
1.88
25394--25427
2
17.0
2
100
0
68
50
50
0
0
1.00
30265--30677
39
10.5
39
91
2
650
28
28
23
18
1.98
31687--31712
2
13.0
2
100
0
52
50
50
0
0
1.00
36861--37388
47
11.1
47
92
2
849
32
9
29
28
1.88
36861--37388
96
5.6
96
94
1
913
32
9
29
28
1.88
36861--37388
190
2.8
190
95
0
923
32
9
29
28
1.88
37507--37585
37
2.1
37
88
0
113
24
18
30
26
1.98
40816--40935
62
1.9
62
89
0
186
32
30
20
16
1.95
40878--41043
39
4.3
39
91
3
262
28
28
22
20
1.98
45066--45139
29
2.6
29
89
4
105
25
16
32
25
1.96
53369--53441
28
2.6
29
88
2
103
26
16
32
24
1.96

Tables:   1

The End!