Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: Scaffold1435
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 30443
ACGTcount: A:0.30, C:0.19, G:0.21, T:0.30
Found at i:12649 original size:44 final size:44
Alignment explanation
Indices: 12599--12736 Score: 115
Period size: 44 Copynumber: 3.2 Consensus size: 44
12589 GACAAAGGAT
12599 CTTGCCTTTCTGCATTGACAGCGAAGCAGATCGAAGACACAAAC
1 CTTGCCTTTCTGCATTGACAGCGAAGCAGATCGAAGACACAAAC
** * * * * * *
12643 CTTGCCTCTT-TCGGTTGTGATA--G-AGCTGGTTGAAGACAAAAGAT
1 CTTGCCT-TTCT-GCAT-TGACAGCGAAGCAGATCGAAGACACAA-AC
* *
12687 CTTGCCTTCCTACATT-ACAGCGAAGCAGATCGAAGACACAAAC
1 CTTGCCTTTCTGCATTGACAGCGAAGCAGATCGAAGACACAAAC
12730 CTTGCCT
1 CTTGCCT
12737 CTTTCGGTTG
Statistics
Matches: 68, Mismatches: 18, Indels: 17
0.66 0.17 0.17
Matches are distributed among these distances:
41 2 0.03
42 1 0.01
43 25 0.37
44 32 0.47
45 4 0.06
46 4 0.06
ACGTcount: A:0.29, C:0.25, G:0.21, T:0.25
Consensus pattern (44 bp):
CTTGCCTTTCTGCATTGACAGCGAAGCAGATCGAAGACACAAAC
Found at i:12680 original size:43 final size:42
Alignment explanation
Indices: 12631--12765 Score: 107
Period size: 44 Copynumber: 3.2 Consensus size: 42
12621 GAAGCAGATC
12631 GAAGACACAAACCTTGCCTCTTTCGGTTGTGATAGAGCTGGTT
1 GAAGACACAAACCTTGCCTCTTTCGGTTGTGAT-GAGCTGGTT
* * * * * * * * *
12674 GAAGACAAAAGATCTTGCCTTCCTAC-ATTACAGCGA--AGCAGATC
1 GAAGACACAA-ACCTTGCC-TCTTTCGGTT---GTGATGAGCTGGTT
12718 GAAGACACAAACCTTGCCTCTTTCGGTTGTGATGAGCT-GTT
1 GAAGACACAAACCTTGCCTCTTTCGGTTGTGATGAGCTGGTT
12759 GAAGACA
1 GAAGACA
12766 AAAGATCTTG
Statistics
Matches: 66, Mismatches: 18, Indels: 18
0.65 0.18 0.18
Matches are distributed among these distances:
40 3 0.05
41 8 0.12
42 7 0.11
43 18 0.27
44 23 0.35
45 4 0.06
47 3 0.05
ACGTcount: A:0.29, C:0.22, G:0.23, T:0.26
Consensus pattern (42 bp):
GAAGACACAAACCTTGCCTCTTTCGGTTGTGATGAGCTGGTT
Found at i:12732 original size:87 final size:86
Alignment explanation
Indices: 12585--12892 Score: 396
Period size: 87 Copynumber: 3.6 Consensus size: 86
12575 GACAGATCAA
* * *
12585 TGAAGACAAAGGATCTTGCCTTTCTGCATTGACAGCGAAGCAGATCGAAGACACAAACCTTGCCT
1 TGAAGACAAAAGATCTTGCCTTCCTGCATTAACAGCGAAGCAGATCGAAGACACAAACCTTGCCT
12650 CTTTCGGTTGTGATAGAGCTGGT
66 CTTTCGGTTGTGAT-GAGCT-GT
*
12673 TGAAGACAAAAGATCTTGCCTTCCTACATT-ACAGCGAAGCAGATCGAAGACACAAACCTTGCCT
1 TGAAGACAAAAGATCTTGCCTTCCTGCATTAACAGCGAAGCAGATCGAAGACACAAACCTTGCCT
12737 CTTTCGGTTGTGATGAGCTGT
66 CTTTCGGTTGTGATGAGCTGT
*
12758 TGAAGACAAAAGATCTTGCCTTCCTGCATTAACAGCGAAGCAGATCGAA-A-ACAAAGCCTTGCA
1 TGAAGACAAAAGATCTTGCCTTCCTGCATTAACAGCGAAGCAGATCGAAGACACAAA-CCTTGCC
** * *
12821 TCCATCGATTG-CAGTGGAGCTAGT
65 TCTTTCGGTTGTGA-T-GAGCT-GT
* ** *
12845 TAAAGA-AGTAGATCTTGCCTTCCTG-ATT-ACAGCGAAGCAGATCAAAGA
1 TGAAGACAAAAGATCTTGCCTTCCTGCATTAACAGCGAAGCAGATCGAAGA
12893 TAGCCTTGCC
Statistics
Matches: 201, Mismatches: 13, Indels: 15
0.88 0.06 0.07
Matches are distributed among these distances:
84 23 0.11
85 51 0.25
86 45 0.22
87 55 0.27
88 27 0.13
ACGTcount: A:0.31, C:0.22, G:0.22, T:0.24
Consensus pattern (86 bp):
TGAAGACAAAAGATCTTGCCTTCCTGCATTAACAGCGAAGCAGATCGAAGACACAAACCTTGCCT
CTTTCGGTTGTGATGAGCTGT
Found at i:13128 original size:46 final size:46
Alignment explanation
Indices: 13056--13310 Score: 201
Period size: 46 Copynumber: 5.8 Consensus size: 46
13046 GAAGATCACA
* * * *
13056 TCAGGTCTTATCTCCCTGAGATTACAGTGGAACAGACCAAAGAATT
1 TCAGATCTTATCTCCCTGAGGTTACAGTGGAGCAGACCGAAGAATT
* * *
13102 TCAGATCTTATCTCCCTGAGGTTACAGCGGAGCAGATCGAAG-ATA
1 TCAGATCTTATCTCCCTGAGGTTACAGTGGAGCAGACCGAAGAATT
* * * **
13147 T-A-ATCCTATCTCCCTGAAGTTACAGTGGAGCGGA-TTAA-AA-T
1 TCAGATCTTATCTCCCTGAGGTTACAGTGGAGCAGACCGAAGAATT
** * * * * * *
13188 AAAGGATCTTATCTCTCTGAAGTTACAGTAGAGTAGATC---GCA--
1 TCA-GATCTTATCTCCCTGAGGTTACAGTGGAGCAGACCGAAGAATT
* * *
13230 TCAGGTCTTATCTCCCTGAGATTACAGTGGAACAGACCGAAGAATT
1 TCAGATCTTATCTCCCTGAGGTTACAGTGGAGCAGACCGAAGAATT
*
13276 GCAGATCTTATC-CCCTGAGGTTACAGTGGAGCAGA
1 TCAGATCTTATCTCCCTGAGGTTACAGTGGAGCAGA
13311 TTGAAGCCAG
Statistics
Matches: 161, Mismatches: 37, Indels: 23
0.73 0.17 0.10
Matches are distributed among these distances:
41 27 0.17
42 5 0.03
43 29 0.18
44 30 0.19
45 24 0.15
46 46 0.29
ACGTcount: A:0.31, C:0.21, G:0.22, T:0.26
Consensus pattern (46 bp):
TCAGATCTTATCTCCCTGAGGTTACAGTGGAGCAGACCGAAGAATT
Found at i:13209 original size:44 final size:44
Alignment explanation
Indices: 13013--13352 Score: 191
Period size: 41 Copynumber: 7.8 Consensus size: 44
13003 TGGAGCGGAT
* * * *
13013 TAAAGGATCTTATCTCTCTGAAGTTACAGTAGAGAAGATC--ACA
1 TAAA-GATCTTATCTCCCTGAAGTTACAGTGGAGCAGATCGAAAA
* * * * *
13056 T-CAGGTCTTATCTCCCTG-AGATTACAGTGGAACAGACCAAAGAA
1 TAAAGATCTTATCTCCCTGAAG-TTACAGTGGAGCAGATCGAA-AA
** * * *
13100 TTTCAGATCTTATCTCCCTGAGGTTACAGCGGAGCAGATCGAAGA
1 -TAAAGATCTTATCTCCCTGAAGTTACAGTGGAGCAGATCGAAAA
* * * *
13145 TATA-ATCCTATCTCCCTGAAGTTACAGTGGAGCGGAT-TAAAA
1 TAAAGATCTTATCTCCCTGAAGTTACAGTGGAGCAGATCGAAAA
* * * *
13187 TAAAGGATCTTATCTCTCTGAAGTTACAGTAGAGTAGATCG--CA
1 TAAA-GATCTTATCTCCCTGAAGTTACAGTGGAGCAGATCGAAAA
* * * *
13230 T-CAGGTCTTATCTCCCTG-AGATTACAGTGGAACAGACCGAAGAA
1 TAAAGATCTTATCTCCCTGAAG-TTACAGTGGAGCAGATCGAA-AA
** * * **
13274 TTGCAGATCTTATC-CCCTGAGGTTACAGTGGAGCAGATTGAAGC
1 -TAAAGATCTTATCTCCCTGAAGTTACAGTGGAGCAGATCGAAAA
* * * *
13318 CAGAGGTCTTATCTCCCT-AAGATTACAGCGGAGCA
1 TAAAGATCTTATCTCCCTGAAG-TTACAGTGGAGCA
13353 AGTCGAAGAC
Statistics
Matches: 226, Mismatches: 52, Indels: 37
0.72 0.17 0.12
Matches are distributed among these distances:
40 4 0.02
41 53 0.23
42 8 0.04
43 44 0.19
44 48 0.21
45 25 0.11
46 43 0.19
47 1 0.00
ACGTcount: A:0.31, C:0.21, G:0.22, T:0.26
Consensus pattern (44 bp):
TAAAGATCTTATCTCCCTGAAGTTACAGTGGAGCAGATCGAAAA
Found at i:13255 original size:174 final size:170
Alignment explanation
Indices: 12935--13316 Score: 601
Period size: 174 Copynumber: 2.2 Consensus size: 170
12925 TTGAAGCCAG
* *
12935 AGATCTTATCTCCCTGAGATTACAGCGGAGCAGATC-AAGATAGTAATCCTATCTCCTTGAGATT
1 AGATCTTATCTCCCTGAGGTTACAGCGGAGCAGATCGAAGATAGTAATCCTATCTCCCTGAGATT
12999 ACAATGGAGCGGATTAAAGGATCTTATCTCTCTGAAGTTACAGTAGAGAAGATCACATCAGGTCT
66 ACAATGGAGCGGATTAAAGGATCTTATCTCTCTGAAGTTACAGTAGAGAAGATCACATCAGGTCT
*
13064 TATCTCCCTGAGATTACAGTGGAACAGACCAAAGAATTTC
131 TATCTCCCTGAGATTACAGTGGAACAGACCAAAGAATTGC
13104 AGATCTTATCTCCCTGAGGTTACAGCGGAGCAGATCGAAGATA-TAATCCTATCTCCCTGA-AGT
1 AGATCTTATCTCCCTGAGGTTACAGCGGAGCAGATCGAAGATAGTAATCCTATCTCCCTGAGA-T
* * *
13167 TACAGTGGAGCGGATTAAAATAAAGGATCTTATCTCTCTGAAGTTACAGTAGAGTAGATCGCATC
65 TACAATGGAGCGGA-T----TAAAGGATCTTATCTCTCTGAAGTTACAGTAGAGAAGATCACATC
*
13232 AGGTCTTATCTCCCTGAGATTACAGTGGAACAGACCGAAGAATTGC
125 AGGTCTTATCTCCCTGAGATTACAGTGGAACAGACCAAAGAATTGC
* *
13278 AGATCTTATC-CCCTGAGGTTACAGTGGAGCAGATTGAAG
1 AGATCTTATCTCCCTGAGGTTACAGCGGAGCAGATCGAAG
13317 CCAGAGGTCT
Statistics
Matches: 197, Mismatches: 9, Indels: 10
0.91 0.04 0.05
Matches are distributed among these distances:
168 1 0.01
169 65 0.33
170 7 0.04
173 27 0.14
174 97 0.49
ACGTcount: A:0.31, C:0.20, G:0.22, T:0.27
Consensus pattern (170 bp):
AGATCTTATCTCCCTGAGGTTACAGCGGAGCAGATCGAAGATAGTAATCCTATCTCCCTGAGATT
ACAATGGAGCGGATTAAAGGATCTTATCTCTCTGAAGTTACAGTAGAGAAGATCACATCAGGTCT
TATCTCCCTGAGATTACAGTGGAACAGACCAAAGAATTGC
Found at i:13283 original size:87 final size:87
Alignment explanation
Indices: 13018--13345 Score: 308
Period size: 87 Copynumber: 3.7 Consensus size: 87
13008 CGGATTAAAG
* * *
13018 GATCTTATCTCTCTGAAGTTACAGTAGAGAAGATCACATCAGGTCTTATCTCCCTGAGATTACAG
1 GATCTTATCTCCCTGAAGTTACAGTAGAGCAGATCGCATCAGGTCTTATCTCCCTGAGATTACAG
*
13083 TGGAACAGACCAAAGAATTTCA
66 TGGAACAGACCAAAGAATTACA
* ** * ** *
13105 GATCTTATCTCCCTGAGGTTACAGCGGAGCAGATCGAAGAT-ATAATCCTATCTCCCTGA-AGTT
1 GATCTTATCTCCCTGAAGTTACAGTAGAGCAGATCG--CATCA-GGTCTTATCTCCCTGAGA-TT
* * ** *
13168 ACAGTGGAGCGGA-TTAA-AA-TAAA
62 ACAGTGGAACAGACCAAAGAATTACA
* *
13191 GGATCTTATCTCTCTGAAGTTACAGTAGAGTAGATCGCATCAGGTCTTATCTCCCTGAGATTACA
1 -GATCTTATCTCCCTGAAGTTACAGTAGAGCAGATCGCATCAGGTCTTATCTCCCTGAGATTACA
* *
13256 GTGGAACAGACCGAAGAATTGCA
65 GTGGAACAGACCAAAGAATTACA
* * * * * *
13279 GATCTTATC-CCCTGAGGTTACAGTGGAGCAGATTGAAGCCAGAGGTCTTATCTCCCTAAGATTA
1 GATCTTATCTCCCTGAAGTTACAGTAGAGCAGATCGCA-TC--AGGTCTTATCTCCCTGAGATTA
13343 CAG
63 CAG
13346 CGGAGCAAGT
Statistics
Matches: 189, Mismatches: 39, Indels: 24
0.75 0.15 0.10
Matches are distributed among these distances:
85 28 0.15
86 28 0.15
87 75 0.40
88 6 0.03
89 52 0.28
ACGTcount: A:0.31, C:0.21, G:0.22, T:0.27
Consensus pattern (87 bp):
GATCTTATCTCCCTGAAGTTACAGTAGAGCAGATCGCATCAGGTCTTATCTCCCTGAGATTACAG
TGGAACAGACCAAAGAATTACA
Found at i:13331 original size:130 final size:128
Alignment explanation
Indices: 13102--13345 Score: 289
Period size: 130 Copynumber: 1.9 Consensus size: 128
13092 CCAAAGAATT
* * *
13102 TCAGATCTTATCTCCCTGAGGTTACAGCGGAGCAGATCGAAGATATAATCCTATCTCCCTGAAGT
1 TCAGATCTTATCTCCCTGAGATTACAGCGGAACAGACCGAAGATATAATCCTATCTCCCTGAAGT
* * *
13167 TACAGTGGAGCGGATTAAAATAAAGGATCTTATCTCTCTGAAG-TTACAGTAGAGTAGATCGCA
66 TACAGTGGAGCAGATTAAAACAAAGGATCTTATCTCCCT-AAGATTACAGTAGAGTAGATCGCA
* * *
13230 TCAGGTCTTATCTCCCTGAGATTACAGTGGAACAGACCGAAGA-ATTGCAGATCTTATC-CCCTG
1 TCAGATCTTATCTCCCTGAGATTACAGCGGAACAGACCGAAGATA-T--A-ATCCTATCTCCCTG
* ** *
13293 AGGTTACAGTGGAGCAGATTGAAGCCAGAGG-TCTTATCTCCCTAAGATTACAG
62 AAGTTACAGTGGAGCAGATT-AAAACAAAGGATCTTATCTCCCTAAGATTACAG
13346 CGGAGCAAGT
Statistics
Matches: 97, Mismatches: 13, Indels: 10
0.81 0.11 0.08
Matches are distributed among these distances:
127 1 0.01
128 39 0.40
129 3 0.03
130 41 0.42
131 13 0.13
ACGTcount: A:0.30, C:0.21, G:0.23, T:0.27
Consensus pattern (128 bp):
TCAGATCTTATCTCCCTGAGATTACAGCGGAACAGACCGAAGATATAATCCTATCTCCCTGAAGT
TACAGTGGAGCAGATTAAAACAAAGGATCTTATCTCCCTAAGATTACAGTAGAGTAGATCGCA
Found at i:13366 original size:21 final size:21
Alignment explanation
Indices: 13342--13385 Score: 63
Period size: 21 Copynumber: 2.1 Consensus size: 21
13332 CCCTAAGATT
13342 ACAGCGGAGCA-AGTCGAAGAC
1 ACAGCGGAGCAGA-TCGAAGAC
*
13363 ACAGCGGAGCGGATCGAAGAC
1 ACAGCGGAGCAGATCGAAGAC
13384 AC
1 AC
13386 TATCCTATCT
Statistics
Matches: 21, Mismatches: 1, Indels: 2
0.88 0.04 0.08
Matches are distributed among these distances:
21 20 0.95
22 1 0.05
ACGTcount: A:0.36, C:0.25, G:0.34, T:0.05
Consensus pattern (21 bp):
ACAGCGGAGCAGATCGAAGAC
Found at i:27307 original size:46 final size:43
Alignment explanation
Indices: 27240--27706 Score: 262
Period size: 44 Copynumber: 10.7 Consensus size: 43
27230 ATTATACAGG
* *
27240 TCTTATCTCCCTGAGATTACAGTGGAACAGACCAAAGAATTTCAGA
1 TCTTATCTCCCTGAGATTACAGTGGAGCAGATCAAAG-A--TCAGA
* * ** *
27286 TCTTATCTCCCTGAGGTTACAGCGGAGCAGATTGAAGCCA-GAGA
1 TCTTATCTCCCTGAGATTACAGTGGAGCAGATCAAAG--ATCAGA
*
27330 TCTTATCTCCCTGAGATTACAGCGGAGCAGATCAAAGAT-AGTAA
1 TCTTATCTCCCTGAGATTACAGTGGAGCAGATCAAAGATCAG--A
* * * * *
27374 TCCTATCTCCTTGAGATTACAATGGAGCGGATTAAAG----GA
1 TCTTATCTCCCTGAGATTACAGTGGAGCAGATCAAAGATCAGA
* * * * *
27413 TCTTATCTCTCTGA-AGTTACAGTAGAGAAGATC--ACATCAGG
1 TCTTATCTCCCTGAGA-TTACAGTGGAGCAGATCAAAGATCAGA
* * *
27454 TCTTATTTCCCTGAGATTACAGTGGAACAGACCAAAGAATTTCAGA
1 TCTTATCTCCCTGAGATTACAGTGGAGCAGATCAAAG-A--TCAGA
* ** *
27500 TCTTATCTCCCTGAGGTTACAGTGGAGCAGATTGAAG-CCAGTAA
1 TCTTATCTCCCTGAGATTACAGTGGAGCAGATCAAAGATCAG--A
* * * *
27544 TCCTATCTCCCTGAGATTACAGTGGAGCGGATTAAA-ATGAAGGA
1 TCTTATCTCCCTGAGATTACAGTGGAGCAGATCAAAGAT-CA-GA
* ** * ** *
27588 TCTTATCTCTCTGA-AGTTACAGCAGAGTAGATC-GTG-TCAGG
1 TCTTATCTCCCTGAGA-TTACAGTGGAGCAGATCAAAGATCAGA
* ** * *
27629 TCTTATTTCCCTGAGATTACAGTGGAATAGA-CTGAAGAATTTTAGA
1 TCTTATCTCCCTGAGATTACAGTGGAGCAGATC-AAAG-A--TCAGA
* *
27675 TCTTATCTCCCTGAGATTATAGCGGAGCAGAT
1 TCTTATCTCCCTGAGATTACAGTGGAGCAGAT
27707 TGAAGCCGAT
Statistics
Matches: 318, Mismatches: 73, Indels: 59
0.71 0.16 0.13
Matches are distributed among these distances:
37 1 0.00
38 1 0.00
39 24 0.08
40 1 0.00
41 52 0.16
42 10 0.03
43 3 0.01
44 128 0.40
45 1 0.00
46 96 0.30
47 1 0.00
ACGTcount: A:0.31, C:0.19, G:0.22, T:0.28
Consensus pattern (43 bp):
TCTTATCTCCCTGAGATTACAGTGGAGCAGATCAAAGATCAGA
Found at i:27669 original size:175 final size:170
Alignment explanation
Indices: 27327--27732 Score: 589
Period size: 175 Copynumber: 2.4 Consensus size: 170
27317 TTGAAGCCAG
** ** *
27327 AGATCTTATCTCCCTGAGATTACAGCGGAGCAGATCAAAGATAGTAATCCTATCTCCTTGAGATT
1 AGATCTTATCTCCCTGAGATTACAGCGGAGCAGATTGAAGCCAGTAATCCTATCTCCCTGAGATT
*
27392 ACAATGGAGCGGATTAAAGGATCTTATCTCTCTGAAGTTACAGTAGAGAAGATCACATCAGGTCT
66 ACAATGGAGCGGATTAAAGGATCTTATCTCTCTGAAGTTACAGCAGAGAAGATCACATCAGGTCT
27457 TATTTCCCTGAGATTACAGTGGAACAGACCAAAGAATTTC
131 TATTTCCCTGAGATTACAGTGGAACAGACCAAAGAATTTC
* *
27497 AGATCTTATCTCCCTGAGGTTACAGTGGAGCAGATTGAAGCCAGTAATCCTATCTCCCTGAGATT
1 AGATCTTATCTCCCTGAGATTACAGCGGAGCAGATTGAAGCCAGTAATCCTATCTCCCTGAGATT
* * ***
27562 ACAGTGGAGCGGATTAAAATGAAGGATCTTATCTCTCTGAAGTTACAGCAGAGTAGATCGTGTCA
66 ACAATGGAGCGGATT---A--AAGGATCTTATCTCTCTGAAGTTACAGCAGAGAAGATCACATCA
* ** *
27627 GGTCTTATTTCCCTGAGATTACAGTGGAATAGACTGAAGAATTTT
126 GGTCTTATTTCCCTGAGATTACAGTGGAACAGACCAAAGAATTTC
*
27672 AGATCTTATCTCCCTGAGATTATAGCGGAGCAGATTGAAGCC-GATAATCCTATCTCCCTGA
1 AGATCTTATCTCCCTGAGATTACAGCGGAGCAGATTGAAGCCAG-TAATCCTATCTCCCTGA
27733 AGTTGCTGCA
Statistics
Matches: 210, Mismatches: 20, Indels: 7
0.89 0.08 0.03
Matches are distributed among these distances:
170 72 0.34
173 1 0.00
174 1 0.00
175 136 0.65
ACGTcount: A:0.31, C:0.19, G:0.21, T:0.29
Consensus pattern (170 bp):
AGATCTTATCTCCCTGAGATTACAGCGGAGCAGATTGAAGCCAGTAATCCTATCTCCCTGAGATT
ACAATGGAGCGGATTAAAGGATCTTATCTCTCTGAAGTTACAGCAGAGAAGATCACATCAGGTCT
TATTTCCCTGAGATTACAGTGGAACAGACCAAAGAATTTC
Found at i:29045 original size:9 final size:10
Alignment explanation
Indices: 28986--29044 Score: 52
Period size: 9 Copynumber: 5.9 Consensus size: 10
28976 TCCTGTCATT
28986 TTATTTATTA
1 TTATTTATTA
28996 TTGAATTTATTA
1 TT--ATTTATTA
29008 TTA-TTATTA
1 TTATTTATTA
*
29017 TCA-TTATTA
1 TTATTTATTA
*
29026 TTATTGCATT-
1 TTATT-TATTA
29036 TTATTTATT
1 TTATTTATT
29045 TATTTATACC
Statistics
Matches: 41, Mismatches: 4, Indels: 9
0.76 0.07 0.17
Matches are distributed among these distances:
9 19 0.46
10 9 0.22
11 3 0.07
12 10 0.24
ACGTcount: A:0.29, C:0.03, G:0.03, T:0.64
Consensus pattern (10 bp):
TTATTTATTA
Done.