Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2019
Parameters: 2 7 7 80 10 50 1000
Length:  56899

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1475--1645
15
10.7
15
66
21
55
69
0
5
23
1.14
1469--1518
19
2.7
19
82
11
59
82
0
2
16
0.77
1475--1547
34
2.1
35
82
12
89
78
1
2
17
0.95
1477--1518
11
3.6
11
84
12
57
85
0
0
14
0.59
1587--1703
29
4.0
29
69
8
85
63
2
7
26
1.35
1568--1654
44
2.0
44
82
13
108
65
0
8
26
1.20
1566--1682
15
8.1
14
71
18
62
64
0
7
26
1.26
2888--2924
20
1.9
18
89
10
56
51
0
0
48
1.00
27604--27647
17
2.6
17
96
0
79
13
13
20
52
1.74
31955--31980
13
2.0
13
100
0
52
15
30
30
23
1.95
32193--32305
56
2.0
57
81
10
133
43
8
15
32
1.77
37950--38025
23
3.3
23
96
0
143
31
26
21
21
1.98
38112--38140
8
3.6
8
100
0
58
34
27
13
24
1.93
38245--38283
18
2.2
17
86
13
53
46
20
0
33
1.51
45279--45354
23
3.3
23
96
0
143
31
26
21
21
1.98
45441--45469
8
3.6
8
100
0
58
34
27
13
24
1.93
45574--45612
18
2.2
17
86
13
53
46
20
0
33
1.51
50806--51531
44
16.4
43
65
18
212
29
17
26
26
1.97
50805--51410
177
3.4
177
85
3
731
30
16
26
26
1.97
51234--51531
132
2.2
134
84
7
369
30
18
24
26
1.98
50805--51498
354
2.0
353
81
7
809
30
17
26
26
1.97
51479--51588
44
2.5
44
82
4
123
30
12
30
27
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51234--51590
132
2.7
131
80
8
343
30
17
24
26
1.97
53741--53809
20
3.5
20
82
7
77
10
39
2
47
1.52

Tables:   1

The End!