Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2052
Parameters: 2 7 7 80 10 50 1000
Length:  42937

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9848--10032
79
2.3
81
83
7
227
24
22
27
24
2.00
9849--10032
40
4.6
40
82
9
207
25
22
27
24
2.00
9901--10065
79
2.1
79
83
6
201
26
21
27
24
1.99
12065--12290
86
2.6
86
74
6
217
36
25
13
24
1.92
12074--12278
43
4.8
42
75
11
184
35
25
13
24
1.93
15911--16039
42
3.1
41
78
2
132
30
16
25
27
1.97
18315--18706
194
2.0
194
93
0
676
31
25
16
26
1.97
24969--25219
48
5.2
48
81
8
287
27
25
17
29
1.98
24985--25232
96
2.6
96
92
0
397
27
25
17
29
1.98
30194--30371
46
3.7
46
77
15
175
28
27
21
21
1.99
30788--30847
30
2.0
30
90
0
93
30
25
8
36
1.85

Tables:   1

The End!