Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1541
Parameters: 2 7 7 80 10 50 1000
Length:  37048

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6282--6505
78
2.8
80
84
6
287
24
21
28
25
1.99
6282--6505
40
5.7
40
85
6
287
24
21
28
25
1.99
8174--8247
27
2.7
27
82
12
89
40
9
22
27
1.85
23372--23406
17
2.0
17
88
5
52
17
22
37
22
1.94
23652--23705
27
2.0
27
82
7
65
33
16
18
31
1.93
23830--23881
26
2.0
26
84
0
68
19
19
25
36
1.95
26062--26102
18
2.3
18
83
8
57
14
26
41
17
1.88
26323--26730
205
2.0
205
93
0
690
31
13
23
31
1.93
28113--28357
80
3.1
80
80
4
221
25
21
28
24
1.99
28060--28322
40
6.6
40
83
4
255
25
21
27
25
1.99
28175--28357
79
2.3
80
81
1
226
26
20
27
25
1.99
31321--31498
27
6.6
27
83
3
205
26
15
28
29
1.96
31322--31477
82
1.9
81
88
3
233
26
15
28
29
1.96
31318--31498
82
2.2
81
83
2
229
27
15
27
29
1.96

Tables:   1

The End!