Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1160
Parameters: 2 7 7 80 10 50 1000
Length:  31401

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4528--4667
32
4.4
32
81
6
169
39
20
20
20
1.93
4544--4665
63
1.9
64
85
5
167
38
20
20
20
1.94
4709--4773
26
2.5
27
85
11
91
32
24
21
21
1.98
4835--4944
24
4.6
24
87
1
123
43
23
8
24
1.81
7320--7353
9
4.0
9
85
14
54
55
0
0
44
0.99
9369--9411
21
2.0
21
95
0
77
39
11
2
46
1.53
11527--11564
16
2.5
16
87
8
53
55
0
0
44
0.99
15284--15491
22
9.1
23
72
8
158
19
2
34
43
1.66
19660--19824
23
7.2
23
76
5
147
16
2
36
44
1.61
19660--19824
45
3.6
45
77
6
170
16
2
36
44
1.61
22841--23120
27
10.4
27
87
1
355
43
18
20
17
1.89
23309--23378
25
2.8
25
87
8
106
12
18
24
44
1.85
23718--23767
21
2.4
21
93
0
82
42
12
4
42
1.60
28065--28109
21
2.2
21
88
4
65
40
11
4
44
1.60

Tables:   1

The End!