Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3710
Parameters: 2 7 7 80 10 50 1000
Length:  34073

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3047--3109
31
2.0
31
84
0
81
26
22
12
38
1.90
3320--3431
25
5.0
23
85
11
119
30
19
19
30
1.97
3351--3431
25
3.4
25
89
5
123
28
20
22
28
1.99
3416--3449
18
1.9
18
94
5
61
35
17
29
17
1.93
3506--3552
20
2.3
20
96
0
85
34
21
10
34
1.88
11161--11223
31
2.0
31
90
0
99
23
25
14
36
1.93
11431--11538
25
4.4
24
90
4
146
28
23
17
30
1.97
11442--11536
25
3.9
25
93
2
149
29
23
18
28
1.98
11408--11538
48
2.6
48
79
11
149
29
22
16
31
1.96
11587--11653
20
3.3
20
93
0
116
32
20
11
34
1.90
11587--11642
11
5.5
11
71
16
57
32
19
12
35
1.89
16434--16484
13
3.9
13
82
10
59
78
5
3
11
1.06
16434--16468
12
2.8
12
95
4
61
77
8
5
8
1.13
18396--18429
17
2.0
17
88
11
52
5
11
29
52
1.61
30136--30313
27
6.6
27
85
3
214
26
14
28
30
1.95
30137--30292
82
1.9
81
89
3
242
26
14
28
30
1.95
30133--30313
82
2.2
81
84
2
238
27
14
27
30
1.95

Tables:   1

The End!