Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2723
Parameters: 2 7 7 80 10 50 1000
Length:  19116

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3773--3902
71
1.9
66
89
9
199
30
20
16
32
1.95
5688--5805
45
2.6
44
88
4
173
27
28
22
21
1.99
9237--9379
71
2.0
71
97
0
268
22
13
31
32
1.92
10177--10335
27
5.9
27
88
0
237
28
22
8
40
1.84
10177--10335
81
2.0
81
93
0
273
28
22
8
40
1.84
10245--10362
54
2.2
54
81
3
130
33
20
10
35
1.86
10336--10557
27
8.0
26
78
13
176
36
19
19
23
1.95
10355--10430
35
2.2
34
85
2
98
43
21
14
21
1.87
10335--10457
62
2.0
61
90
1
192
39
20
17
21
1.92
10388--10552
80
2.1
81
93
2
280
35
18
21
24
1.95
10392--10556
27
6.1
27
86
1
224
34
20
20
24
1.96
10781--10937
70
2.3
67
83
5
190
19
28
22
30
1.98
11040--11201
6
26.3
6
71
16
118
18
17
14
49
1.80
11040--11180
31
4.5
31
78
10
153
18
17
14
48
1.81
11043--11101
25
2.4
25
88
0
82
20
18
13
47
1.82
11069--11150
37
2.2
37
91
0
128
17
14
17
51
1.77
11068--11169
19
5.8
19
69
21
87
16
17
16
49
1.81
15407--15503
33
2.9
33
72
6
88
21
23
11
43
1.85

Tables:   1

The End!