Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1312
Parameters: 2 7 7 80 10 50 1000
Length:  54216

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1660--1809
41
3.7
41
85
1
221
20
23
28
28
1.99
15244--15292
3
16.3
3
100
0
98
0
32
0
67
0.91
17786--17871
42
2.0
42
88
4
127
39
13
22
24
1.90
27180--27217
14
2.7
14
91
0
58
34
10
34
21
1.87
31338--31437
50
2.0
50
94
0
173
35
11
26
28
1.90
41171--41217
23
2.0
23
88
8
69
42
38
4
14
1.66
42705--42766
14
4.3
14
79
16
56
45
4
0
50
1.23
42870--42905
17
2.1
18
89
5
56
30
19
0
50
1.48
49822--49854
14
2.4
14
94
0
57
30
3
0
66
1.06
50297--50358
14
4.3
14
79
16
56
45
4
0
50
1.23
50931--50959
12
2.3
13
94
5
51
65
6
6
20
1.40
52380--52556
78
2.3
76
92
4
286
20
19
28
32
1.97
53461--53598
41
3.4
41
83
2
197
20
23
28
28
1.99

Tables:   1

The End!