Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3165
Parameters: 2 7 7 80 10 50 1000
Length:  41588

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1379--1567
40
4.8
40
91
2
206
27
28
20
24
1.99
1422--1566
39
3.7
40
93
2
215
28
26
20
24
1.99
9451--9640
40
4.8
40
90
3
208
27
27
20
24
1.99
15660--15695
17
2.1
17
100
0
72
50
11
16
22
1.77
23345--23385
21
2.0
21
100
0
82
26
4
19
48
1.69
28992--29058
34
1.9
35
90
3
109
43
0
14
41
1.46
29160--29657
126
4.0
126
87
1
696
39
16
16
27
1.90
29160--29657
251
2.0
251
87
1
712
39
16
16
27
1.90
29141--29660
125
4.2
126
85
3
667
38
16
16
28
1.91
31562--31631
27
2.6
27
95
2
113
31
28
12
27
1.93
31562--31659
28
3.5
28
90
2
135
31
28
13
26
1.94
39631--39700
27
2.6
26
95
2
95
31
28
12
27
1.93
39631--39728
28
3.5
28
90
2
135
31
28
13
26
1.94

Tables:   1

The End!