Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2577
Parameters: 2 7 7 80 10 50 1000
Length:  31891

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1146--1268
28
4.5
27
78
10
135
27
29
16
26
1.97
1146--1269
57
2.3
52
81
12
142
27
29
16
27
1.97
9279--9455
27
6.6
27
83
5
205
29
27
15
27
1.96
9279--9455
55
3.3
54
83
4
214
29
27
15
27
1.96
12062--12167
48
2.2
47
82
11
126
14
24
1
59
1.45
12231--12366
21
6.7
21
70
17
51
8
19
2
69
1.28
12230--12286
14
4.1
14
75
16
57
8
17
1
71
1.19
12293--12351
18
3.4
17
84
9
73
6
18
5
69
1.30
12248--12354
6
17.7
6
67
7
56
7
19
2
70
1.24
13391--13505
31
3.4
31
70
23
97
6
16
5
71
1.27
13368--13526
72
2.2
72
97
2
302
9
15
5
70
1.31
13368--13556
72
2.6
70
89
7
258
11
13
4
70
1.31
15384--15411
4
7.0
4
100
0
56
25
0
0
75
0.81
16338--16434
30
3.2
31
73
5
101
27
28
15
27
1.96
18149--18413
132
2.0
132
98
0
512
30
12
20
35
1.90
19254--19350
30
3.2
30
76
2
106
27
27
16
27
1.97
23338--23542
27
7.6
27
83
4
216
26
15
28
29
1.96
23339--23542
54
3.8
54
82
5
241
26
15
28
29
1.96
31469--31670
27
7.6
27
81
7
198
26
15
29
28
1.96
31470--31670
53
3.8
52
78
10
201
26
15
29
28
1.96
31470--31670
80
2.5
78
78
7
199
26
15
29
28
1.96

Tables:   1

The End!