Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold829
Parameters: 2 7 7 80 10 50 1000
Length:  38829

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
621--663
8
5.4
8
79
20
54
11
0
11
76
1.02
613--664
18
3.2
16
86
10
63
11
1
11
75
1.14
613--661
14
3.8
14
76
20
61
12
2
12
73
1.18
3272--3321
19
2.6
20
81
6
59
42
14
18
26
1.87
5396--5462
29
2.3
29
100
0
134
64
10
2
22
1.39
5406--5454
12
3.2
16
68
26
52
61
8
4
26
1.42
5499--5524
13
2.0
13
100
0
52
61
0
0
38
0.96
7985--8014
6
5.0
6
100
0
60
33
16
50
0
1.46
12339--12381
17
2.4
19
81
18
56
58
0
9
32
1.30
12530--12666
68
2.0
68
100
0
274
37
13
1
47
1.51
20021--20062
17
2.3
18
88
12
59
59
0
7
33
1.25
22198--22228
14
2.2
14
94
0
53
19
9
32
38
1.84
23808--23856
24
2.0
24
100
0
98
26
20
12
40
1.87
26846--26890
23
2.0
22
83
8
56
57
0
0
42
0.98
26864--26937
19
3.8
18
73
18
60
62
1
1
35
1.12
26850--26966
29
3.9
30
75
14
91
63
2
0
33
1.14
38156--38196
21
1.9
22
85
5
57
9
14
24
51
1.72
38726--38791
13
5.1
13
77
0
78
33
6
24
36
1.80

Tables:   1

The End!