Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2993
Parameters: 2 7 7 80 10 50 1000
Length:  51661

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1578--1656
29
2.7
29
86
5
106
27
32
15
24
1.95
9905--9983
29
2.7
29
86
5
106
27
32
15
24
1.95
13010--13100
46
2.0
46
86
0
128
27
31
6
34
1.83
13117--13192
22
3.3
22
66
28
59
26
27
9
36
1.87
13114--13452
47
7.2
47
90
0
489
26
27
11
35
1.90
13209--13379
24
7.4
22
64
18
78
24
27
13
34
1.93
15086--15145
26
2.4
25
81
13
70
66
3
1
28
1.17
15098--15146
26
2.0
24
88
8
71
63
4
0
32
1.13
15117--15175
21
2.8
22
85
7
70
69
6
0
23
1.12
15222--15254
15
2.1
16
88
11
50
69
0
0
30
0.88
20222--20392
93
1.8
93
93
2
299
28
28
21
22
1.99
20214--20389
46
3.8
46
77
14
200
29
27
20
22
1.98
27728--27899
93
1.8
93
96
0
317
27
29
21
20
1.98
27721--27896
46
3.8
46
79
12
216
28
29
21
20
1.98
29912--30042
1
131.0
1
95
0
235
0
97
0
1
0.18
38045--38214
93
1.8
92
91
6
281
22
20
28
28
1.99
45546--45716
45
3.8
45
74
17
144
22
19
28
29
1.98
50704--50750
19
2.5
19
80
16
62
25
0
8
65
1.20

Tables:   1

The End!