Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1159
Parameters: 2 7 7 80 10 50 1000
Length:  42521

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1912--1942
4
7.5
4
92
7
53
77
0
0
22
0.77
12491--12557
11
5.2
13
70
22
52
74
2
14
7
1.16
13575--13680
48
2.2
47
85
9
135
59
1
24
14
1.45
15350--15396
20
2.3
20
85
0
67
29
36
12
21
1.91
16946--16989
22
2.0
22
95
0
79
25
36
4
34
1.76
22381--22443
21
3.0
21
88
2
81
33
31
4
30
1.78
22767--22805
11
3.4
11
83
13
51
76
2
7
12
1.09
22774--22807
13
2.6
13
100
0
68
82
0
5
11
0.83
25007--25060
17
3.2
17
81
0
63
75
3
12
7
1.14
29237--29299
21
3.0
21
88
2
81
33
31
4
30
1.78
30234--30296
30
2.1
30
82
11
76
26
31
7
33
1.85
31484--31587
18
5.8
17
67
17
52
66
0
23
9
1.27
35802--35864
33
1.9
33
84
12
85
12
26
6
53
1.62
35861--35941
27
3.1
25
77
19
85
13
17
0
69
1.20
35843--35928
13
6.8
12
72
15
66
15
19
1
63
1.36
35923--35971
20
2.2
22
79
17
57
8
18
2
71
1.21

Tables:   1

The End!