Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1777
Parameters: 2 7 7 80 10 50 1000
Length:  38150

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1370--1513
38
3.7
39
86
9
206
25
28
21
25
1.99
1370--1513
78
1.9
77
89
7
229
25
28
21
25
1.99
9363--9568
39
5.2
40
90
5
296
24
27
22
25
2.00
9386--9572
39
4.7
40
90
5
299
25
27
21
25
1.99
9386--9572
79
2.4
79
91
1
304
25
27
21
25
1.99
12563--12674
57
2.0
57
96
0
206
41
14
13
30
1.84
14941--15025
40
2.2
40
84
2
109
30
31
20
17
1.95
21472--21683
50
4.3
49
76
9
200
29
11
18
40
1.86
21499--21683
96
1.9
96
87
2
273
29
10
18
41
1.84
25440--25474
16
2.2
16
90
5
54
22
22
20
34
1.97
25843--26162
47
6.8
47
69
13
151
28
19
28
24
1.98
25843--26063
94
2.4
91
81
6
250
28
19
28
23
1.98
28116--28410
40
7.4
39
94
1
450
26
27
22
23
2.00
28116--28410
119
2.5
118
91
5
452
26
27
22
23
2.00
36217--36507
40
7.5
39
90
7
409
25
27
23
23
2.00
36243--36507
79
3.4
79
93
3
432
26
28
23
22
1.99

Tables:   1

The End!