Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2542
Parameters: 2 7 7 80 10 50 1000
Length:  30071

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1549--1588
15
2.7
15
88
0
53
20
15
7
57
1.61
4055--4108
27
2.0
27
81
0
63
40
7
12
38
1.72
8993--9052
27
2.3
26
85
2
75
35
20
23
21
1.96
9800--9857
27
2.1
27
90
0
89
22
22
20
34
1.97
16444--16524
27
3.0
26
80
7
72
34
20
23
20
1.97
17232--17291
27
2.2
27
81
0
66
23
18
28
30
1.98
17240--17306
27
2.5
27
87
0
89
22
20
20
35
1.96
18595--18644
18
2.8
18
77
19
52
8
32
2
58
1.39
18612--18726
18
6.4
18
69
18
69
8
24
1
65
1.31
18676--18731
21
2.7
20
83
8
67
5
21
3
69
1.24
22661--22720
28
2.1
29
84
9
79
40
6
23
30
1.80
25309--25458
67
2.2
67
81
8
171
32
17
28
21
1.96
25333--25516
67
2.8
64
77
8
194
29
17
29
22
1.97
29741--29890
67
2.2
67
81
8
171
32
17
28
21
1.96
29765--29948
67
2.8
64
77
8
194
29
17
29
22
1.97

Tables:   1

The End!