Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3002
Parameters: 2 7 7 80 10 50 1000
Length:  28689

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1142--1188
3
15.7
3
81
16
53
25
2
2
70
1.10
1723--1753
16
1.9
16
93
0
53
35
6
3
54
1.42
4430--4485
28
2.0
29
82
3
69
53
1
1
42
1.21
5245--5274
3
10.0
3
100
0
60
33
0
0
66
0.92
5426--5484
24
2.4
25
83
13
70
40
0
28
30
1.57
5628--5723
39
2.5
39
80
6
108
20
23
28
27
1.99
16476--16772
44
6.9
44
73
12
206
31
20
21
25
1.98
16479--16772
46
6.8
46
73
13
187
32
20
21
25
1.98
16519--16804
44
6.7
44
70
14
138
31
21
21
25
1.98
16519--16974
218
2.1
213
79
8
451
31
19
21
26
1.98
16732--17184
175
2.6
172
81
7
524
32
18
21
27
1.97
16733--17199
85
5.4
88
69
10
266
32
18
21
27
1.97
17480--17548
27
2.6
27
95
2
122
36
42
7
14
1.73
18673--18702
3
9.7
3
92
7
51
30
3
0
66
1.07
18652--18702
19
2.7
20
82
11
54
23
5
1
68
1.22

Tables:   1

The End!