Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1425
Parameters: 2 7 7 80 10 50 1000
Length:  32825

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3174--3349
56
3.1
56
99
0
343
45
9
22
22
1.80
4477--4701
40
5.7
40
83
7
262
25
22
27
25
2.00
4477--4724
119
2.1
119
80
8
274
26
21
26
25
2.00
6067--6219
40
3.8
40
82
6
195
26
28
20
24
1.99
6067--6219
79
1.9
80
85
6
213
26
28
20
24
1.99
10363--10434
19
3.7
18
73
14
54
45
2
11
40
1.54
10373--10425
20
2.7
19
77
11
54
41
1
11
45
1.51
12468--12519
18
2.9
18
76
0
59
28
9
19
42
1.82
13193--13247
17
3.2
17
81
0
74
34
5
16
43
1.71
13798--14010
75
2.8
75
94
0
363
37
6
20
35
1.79
16412--16491
44
1.9
40
97
0
115
36
28
6
28
1.81
16698--16780
41
2.0
41
97
0
157
59
15
3
21
1.52
17064--17234
46
3.7
46
95
0
288
27
28
23
21
1.99
21936--21983
21
2.3
21
75
3
53
25
31
31
12
1.92
23682--23859
27
6.6
27
83
5
180
28
28
16
26
1.97
23703--23858
82
1.9
81
86
3
224
28
28
16
26
1.97
31682--31859
27
6.6
27
83
5
180
29
28
15
26
1.96
31703--31858
82
1.9
81
86
3
224
28
28
16
26
1.97

Tables:   1

The End!