Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3580
Parameters: 2 7 7 80 10 50 1000
Length:  30277

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3617--3651
14
2.3
16
90
9
56
80
0
2
17
0.84
9623--9671
19
2.5
19
84
12
64
57
0
6
36
1.24
9631--9669
20
2.0
19
90
5
60
58
0
5
35
1.20
9646--9684
14
2.8
14
84
0
51
58
0
2
38
1.12
11823--11858
16
2.2
16
95
0
63
52
41
0
5
1.24
13042--13083
3
14.0
3
81
18
52
33
0
0
66
0.92
25896--26502
251
2.5
251
88
6
909
28
16
20
35
1.94
25971--26488
126
4.1
127
94
3
897
28
16
19
35
1.94
26390--26541
72
2.1
72
84
7
193
31
16
17
34
1.93
27203--27235
16
2.0
17
94
5
59
51
42
0
6
1.26
27204--27239
16
2.2
16
90
5
54
55
36
0
8
1.30
28256--28310
3
19.0
3
88
7
78
32
3
0
63
1.12

Tables:   1

The End!