Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1794
Parameters: 2 7 7 80 10 50 1000
Length:  39103

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11090--11138
22
2.3
20
82
6
53
61
12
2
24
1.42
12148--12268
46
2.6
48
88
2
165
23
27
18
30
1.98
24228--24289
31
2.0
32
84
9
83
35
17
24
22
1.95
29707--29862
82
1.9
81
85
3
215
26
16
28
28
1.97
29706--29859
55
2.9
52
82
7
175
27
16
27
27
1.97
29707--29862
27
5.7
27
81
6
163
26
16
28
28
1.97
29699--29883
27
6.8
27
75
9
101
26
16
28
29
1.97
29699--29883
82
2.3
81
78
2
210
26
16
28
29
1.97
37592--37747
82
1.9
81
85
3
215
26
16
28
28
1.97
37591--37744
55
2.9
52
82
7
175
27
16
27
27
1.97
37592--37747
27
5.7
27
81
6
163
26
16
28
28
1.97
37584--37768
27
6.8
27
75
9
101
26
16
28
29
1.97
37584--37768
82
2.3
81
78
2
210
26
16
28
29
1.97

Tables:   1

The End!