Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1873
Parameters: 2 7 7 80 10 50 1000
Length:  38543

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3629--3784
67
2.4
64
81
4
179
28
14
31
25
1.95
9275--9318
12
3.7
11
82
11
52
15
6
0
77
0.97
9273--9318
18
2.6
17
86
6
56
17
6
0
76
1.00
9316--9369
26
2.1
26
86
10
76
22
12
1
62
1.39
12838--12905
21
2.9
25
82
17
108
39
23
22
14
1.91
14854--14897
20
2.2
20
88
8
63
20
9
0
70
1.14
14845--14907
27
2.3
27
84
10
76
23
6
0
69
1.11
15128--15156
14
2.0
15
93
6
51
10
13
6
68
1.37
21201--21241
21
2.0
21
90
0
64
17
24
19
39
1.92
26009--26186
28
6.4
28
92
1
277
26
11
27
34
1.90
35682--35859
27
6.6
27
83
3
205
26
15
28
29
1.96
35683--35838
82
1.9
81
88
3
233
26
15
28
29
1.96
35679--35859
82
2.2
81
83
2
229
27
15
27
29
1.96

Tables:   1

The End!