Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold849
Parameters: 2 7 7 80 10 50 1000
Length:  51102

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5478--5505
4
7.0
4
100
0
56
75
0
0
25
0.81
7565--7711
27
5.6
27
79
6
140
29
28
14
27
1.96
7592--7711
53
2.2
55
82
5
147
28
27
15
28
1.96
11455--11498
17
2.6
17
85
10
63
79
2
4
13
0.98
11456--11512
14
3.7
16
81
13
75
78
3
3
14
1.01
11461--11517
29
1.9
29
92
3
96
71
3
7
17
1.22
11550--11632
33
2.5
33
86
9
116
75
2
10
10
1.13
12518--12563
20
2.2
20
84
3
56
65
0
26
8
1.21
12570--12609
6
6.7
6
97
0
62
32
0
22
45
1.53
20952--21129
27
6.6
27
81
3
169
30
29
14
25
1.95
20952--21129
54
3.3
54
84
3
214
30
29
14
25
1.95
25120--25158
10
3.8
10
93
6
69
33
17
17
30
1.94
25119--25158
21
1.9
21
100
0
80
35
17
17
30
1.93
26630--26673
22
2.0
22
86
0
61
25
31
4
38
1.76
29422--29473
6
8.7
6
75
8
52
73
0
21
5
1.04
31089--31349
130
2.0
130
84
1
344
29
24
19
26
1.99
31460--31507
20
2.4
20
71
0
51
22
29
16
31
1.96
32912--33007
20
4.8
20
70
13
56
18
33
15
32
1.93
36676--36772
30
3.2
30
73
2
97
28
14
26
29
1.95
39745--39790
12
4.0
11
86
10
65
71
2
8
17
1.21
39744--39787
13
3.7
12
87
9
63
77
2
6
13
1.07
39743--39790
24
2.0
24
91
0
78
72
2
8
16
1.18
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46910--46939
15
2.0
15
93
0
51
70
6
6
16
1.31
49192--49245
23
2.2
25
78
15
60
62
3
22
11
1.43

Tables:   1

The End!