Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1362
Parameters: 2 7 7 80 10 50 1000
Length:  47637

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3406--3466
31
2.0
31
87
6
88
44
3
24
27
1.69
3762--3807
1
46.0
1
100
0
92
100
0
0
0
0.00
4763--4830
27
2.5
27
83
9
77
27
13
26
32
1.93
9571--9622
27
2.0
26
84
3
68
34
21
26
17
1.95
16972--17028
19
2.8
20
73
10
62
26
22
35
15
1.94
16945--17027
41
2.0
41
88
0
121
28
22
28
19
1.98
17263--17294
8
4.0
8
100
0
64
12
37
25
25
1.91
23159--23255
48
2.0
48
95
0
176
24
13
26
35
1.93
25004--25035
16
2.0
16
93
0
55
53
31
6
9
1.58
26560--26647
28
3.1
29
85
4
117
26
17
30
26
1.97
33167--33358
40
4.8
40
89
1
244
27
28
20
23
1.99
38287--38436
27
5.5
27
82
4
149
30
26
14
28
1.95
38297--38439
55
2.6
54
81
4
171
30
27
14
27
1.95
43190--43366
27
6.6
27
84
2
203
29
28
15
27
1.96
43211--43365
81
1.9
81
88
2
231
29
28
15
27
1.96
44657--44698
20
2.1
20
82
8
50
14
26
0
59
1.35
46639--46735
2
53.5
2
68
19
61
58
0
1
40
1.05
46622--46756
9
15.4
9
70
25
78
57
0
2
39
1.16
46622--46764
41
3.5
42
78
17
133
58
0
2
38
1.18
46645--46764
37
3.3
37
78
10
131
58
0
2
39
1.12

Tables:   1

The End!