Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2173
Parameters: 2 7 7 80 10 50 1000
Length:  38051

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4706--4750
22
2.0
22
100
0
90
33
17
17
31
1.94
10928--10992
20
3.3
19
70
8
58
12
33
20
33
1.89
10914--11156
40
6.1
40
86
1
326
18
28
18
34
1.95
10914--11156
120
2.0
120
90
0
378
18
28
18
34
1.95
15925--16218
51
5.8
51
77
7
287
28
15
27
29
1.96
15925--16206
102
2.8
102
89
2
408
28
15
27
29
1.96
20861--21056
100
2.0
100
94
0
347
29
22
10
37
1.87
22856--22901
21
2.1
22
84
4
58
67
2
19
10
1.31
27039--27230
101
1.9
101
93
2
332
29
21
9
39
1.85
32166--32508
102
3.4
100
86
3
431
28
16
26
29
1.96
32166--32502
51
6.7
50
80
7
326
28
16
26
29
1.96
33794--33893
48
2.1
48
96
0
182
28
14
25
33
1.94

Tables:   1

The End!