Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1022
Parameters: 2 7 7 80 10 50 1000
Length:  35321

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
474--657
40
4.7
40
79
10
184
25
21
28
25
1.99
526--680
79
2.0
79
81
10
183
26
20
27
25
1.99
7078--7256
85
2.1
85
100
0
358
37
8
27
26
1.85
8424--8608
40
4.7
40
81
7
209
25
21
28
24
1.99
8477--8631
79
2.0
79
82
7
190
26
21
27
25
1.99
10023--10186
40
4.2
39
80
6
152
28
27
20
24
1.99
10046--10207
40
4.1
39
90
1
207
29
27
20
23
1.99
10179--10235
28
2.0
28
100
0
114
33
28
17
21
1.96
10207--10295
40
2.2
40
84
7
110
26
30
19
23
1.98
20462--20519
24
2.5
23
81
16
66
62
0
5
32
1.18
20790--20946
49
3.2
48
94
5
273
31
7
29
30
1.85
21064--21141
36
2.1
37
88
2
113
24
19
30
25
1.98
22500--22675
40
4.4
40
82
7
198
25
21
26
26
2.00
22544--22708
79
2.1
79
82
6
192
26
20
26
26
1.99
30662--30846
79
2.3
81
84
7
236
24
22
27
25
2.00
30663--30846
40
4.6
40
83
9
216
24
22
27
25
2.00
30715--30879
79
2.1
79
84
6
210
26
21
27
25
1.99

Tables:   1

The End!