Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold598
Parameters: 2 7 7 80 10 50 1000
Length:  47513

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
350--389
21
1.9
21
85
10
55
10
20
2
67
1.31
9019--9045
12
2.2
12
100
0
54
77
7
0
14
0.97
9977--10036
18
3.2
18
78
7
66
73
3
16
6
1.18
12205--12270
33
2.0
33
82
8
80
33
16
22
27
1.96
13368--13396
12
2.4
12
100
0
58
79
6
0
13
0.93
16307--16366
18
3.2
18
78
7
66
73
3
16
6
1.18
18542--18607
33
2.0
33
82
8
80
33
16
22
27
1.96
20810--20863
23
2.2
25
78
15
60
62
3
22
11
1.43
39174--39208
18
1.9
18
88
11
54
57
0
20
22
1.41
41569--41625
12
4.5
12
79
12
60
73
3
7
15
1.18
41569--41625
27
2.1
27
86
0
78
73
3
7
15
1.18
41632--41660
12
2.5
12
94
5
51
86
0
13
0
0.58
41608--41696
33
2.7
32
80
11
92
73
4
16
5
1.20
42678--42838
12
13.7
12
68
14
50
65
3
20
10
1.36
42700--42814
6
19.2
6
67
12
58
70
3
19
6
1.25
42710--42803
18
5.3
17
72
15
75
69
2
20
8
1.25
45864--45912
17
2.8
18
84
12
66
67
6
0
26
1.14

Tables:   1

The End!