Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1604
Parameters: 2 7 7 80 10 50 1000
Length:  38432

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12--89
1
78.0
1
92
0
129
96
2
0
1
0.27
643--899
47
5.5
46
84
8
290
30
28
8
33
1.86
647--899
94
2.7
96
86
6
331
30
28
8
33
1.86
5164--5374
78
2.7
78
89
7
308
26
28
21
23
1.99
5164--5374
38
5.5
40
92
5
314
26
28
21
23
1.99
5164--5374
116
1.8
115
87
7
320
26
28
21
23
1.99
13058--13262
40
5.2
40
96
1
360
26
27
22
22
1.99
20993--21260
40
6.8
40
92
2
391
26
27
22
23
1.99
21000--21260
79
3.3
80
91
3
404
27
27
22
22
1.99
27213--27438
49
4.6
49
83
3
281
29
27
17
25
1.98
27213--27438
100
2.3
98
85
2
281
29
27
17
25
1.98
32802--32842
20
2.0
21
95
4
75
34
4
4
56
1.42
36561--36586
13
2.0
13
100
0
52
46
0
0
53
1.00

Tables:   1

The End!