Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3660
Parameters: 2 7 7 80 10 50 1000
Length:  40627

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1416--1456
11
3.8
11
80
6
57
70
2
7
19
1.22
7555--7616
27
2.3
28
77
8
74
69
1
20
8
1.23
18220--18272
23
2.4
22
76
20
56
9
18
1
69
1.25
20601--20631
4
8.0
4
92
7
55
77
0
0
22
0.77
23938--23991
20
2.7
20
82
5
65
31
14
29
24
1.95
29300--29336
19
1.9
19
100
0
74
37
21
18
21
1.94
31758--31807
24
2.1
24
88
7
75
48
12
18
22
1.80
37008--37040
8
4.2
8
88
7
50
63
0
0
36
0.95
37011--37060
23
2.2
23
85
7
66
68
2
0
30
1.01
37501--37576
21
3.7
21
80
7
102
36
11
10
40
1.76
37480--37570
21
4.3
20
80
8
85
39
13
8
38
1.75
37514--37577
19
3.3
19
86
4
83
37
14
9
39
1.78
37862--38389
132
4.0
132
94
0
903
24
25
19
30
1.98
38030--38346
44
7.2
44
62
8
106
25
23
20
31
1.98

Tables:   1

The End!