Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1326
Parameters: 2 7 7 80 10 50 1000
Length:  34993

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
389--454
26
2.5
27
84
15
86
18
22
12
46
1.81
3070--3757
45
15.3
45
86
3
888
31
24
16
27
1.96
5079--5129
6
9.0
6
79
12
54
1
13
1
82
0.85
5083--5129
17
2.8
17
87
6
60
2
12
2
82
0.84
5079--5131
11
4.7
11
80
2
61
1
13
1
83
0.82
17136--17442
18
17.3
18
74
10
240
44
11
12
30
1.78
17137--17442
35
8.7
34
74
9
215
44
11
12
31
1.78
17178--17442
71
3.7
68
77
10
207
44
10
12
31
1.77
17397--17453
18
3.2
18
78
14
64
35
8
15
40
1.79
17637--17682
19
2.4
19
92
3
74
34
8
13
43
1.74
17997--18074
10
8.4
9
74
14
70
0
19
2
78
0.87
17997--18046
18
2.8
17
87
9
64
0
16
2
82
0.77
18006--18035
15
1.9
16
93
6
53
0
13
0
86
0.57
17997--18074
27
2.9
28
79
7
81
0
19
2
78
0.87
18327--18418
4
24.8
4
77
18
69
1
25
0
73
0.89
18357--18427
25
2.8
26
91
8
112
1
21
0
77
0.85
18764--18889
29
4.3
30
77
5
123
45
7
15
31
1.74
19114--19865
82
9.5
80
84
7
842
34
19
16
29
1.94
28299--28602
18
17.4
17
69
13
152
46
11
12
29
1.77
28300--28602
53
5.8
53
70
10
131
45
11
12
30
1.77
28438--28602
70
2.3
69
78
11
176
47
11
12
28
1.76
28309--28602
35
8.4
35
71
9
145
45
11
12
30
1.77
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
28774--28815
17
2.5
17
88
3
59
52
7
9
30
1.61
28796--28839
18
2.4
19
88
3
63
40
9
11
38
1.73
28993--29046
14
3.5
15
80
12
56
68
5
1
24
1.21
29137--29179
12
3.6
12
80
0
59
0
20
0
79
0.74
29140--29183
18
2.5
18
85
10
56
0
20
0
79
0.73
29132--29185
24
2.2
24
86
0
81
0
22
0
77
0.76
29449--29536
3
29.0
3
80
15
69
0
29
0
70
0.88
29448--29531
22
3.7
23
82
14
104
0
27
0
72
0.85
29438--29529
29
3.1
29
80
14
100
1
26
0
72
0.91
29480--29522
4
11.5
4
85
14
65
0
23
0
76
0.78
30891--30938
21
2.3
20
83
16
55
66
6
0
27
1.15
31464--31530
28
2.4
28
77
5
64
49
4
17
28
1.66

Tables:   1

The End!