Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1061
Parameters: 2 7 7 80 10 50 1000
Length:  29501

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2385--2856
237
2.0
237
91
1
759
33
15
19
31
1.93
2385--2856
118
4.0
119
92
1
734
33
15
19
31
1.93
2777--2987
83
2.5
84
86
3
300
35
17
19
27
1.95
6298--6334
18
2.1
18
100
0
74
43
16
21
18
1.88
6704--6960
27
9.6
27
80
7
139
26
19
17
36
1.94
6679--6840
54
3.0
54
76
7
150
33
21
14
30
1.94
6778--6995
53
4.1
52
83
7
224
21
16
19
42
1.89
6778--6995
80
2.7
79
81
7
235
21
16
19
42
1.89
6778--6995
27
8.2
26
83
9
219
21
16
19
42
1.89
17844--17884
21
2.0
21
90
0
64
19
29
21
29
1.98
22241--22265
13
1.9
13
100
0
50
32
0
4
64
1.12
25951--26011
19
3.3
18
80
13
61
29
4
1
63
1.24
28665--28712
17
2.9
17
79
11
55
70
0
27
2
0.98

Tables:   1

The End!