Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1947
Parameters: 2 7 7 80 10 50 1000
Length:  42695

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
660--987
43
7.3
46
80
13
332
33
9
30
27
1.88
640--987
46
7.7
47
80
14
362
33
8
30
27
1.87
661--936
83
3.1
88
82
11
341
32
8
29
28
1.87
1106--1184
36
2.1
37
88
4
115
24
20
31
24
1.98
2999--3351
40
8.9
40
85
5
328
24
21
27
25
1.99
6228--6497
47
5.7
47
92
0
416
31
8
30
28
1.88
6616--6694
37
2.1
37
88
0
113
24
17
31
26
1.97
9133--9796
328
2.0
328
99
0
1301
31
16
19
32
1.94
12218--13324
553
2.0
553
94
0
1946
30
17
21
29
1.96
18920--19040
22
5.3
23
74
15
83
34
17
28
19
1.94
18933--19040
23
4.8
23
75
14
100
35
17
29
17
1.93
18915--19040
45
2.8
45
75
10
132
35
16
27
19
1.94
20609--20728
60
2.0
60
96
0
222
35
11
26
26
1.91
20797--20923
44
2.9
45
80
5
134
26
15
22
34
1.95
22586--22687
49
2.1
49
100
0
204
31
7
18
42
1.79
27309--27525
39
5.6
39
93
0
371
22
21
27
29
1.99
35126--35458
39
8.6
39
93
0
560
21
21
27
30
1.98
35126--35458
155
2.1
156
93
0
560
21
21
27
30
1.98

Tables:   1

The End!