Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2083
Parameters: 2 7 7 80 10 50 1000
Length:  41000

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4352--4599
50
4.8
50
85
5
302
20
29
23
26
1.99
4351--4599
100
2.4
104
87
7
348
20
29
23
26
1.99
4694--4725
13
2.5
13
94
0
55
56
12
0
31
1.37
4937--4994
30
1.9
30
85
0
80
31
22
3
43
1.70
6134--6161
4
7.0
4
100
0
56
50
0
0
50
1.00
7641--7909
131
2.0
132
85
3
355
23
21
15
39
1.92
13209--13237
15
2.0
15
93
6
51
62
0
0
37
0.96
18707--18749
19
2.2
20
84
12
54
11
6
9
72
1.29
20057--20143
22
4.2
21
82
11
99
31
0
11
57
1.34
20081--20137
19
2.9
19
86
2
78
33
0
14
52
1.41
20177--20377
27
8.0
26
72
19
122
30
1
13
53
1.49
20180--20373
49
3.9
49
87
6
284
29
1
14
54
1.50
20299--20356
22
2.9
19
71
14
53
34
1
12
51
1.49
20180--20372
97
2.0
100
92
3
329
30
1
13
54
1.49
20573--20646
38
1.9
38
97
0
139
54
4
2
39
1.34
20756--20797
16
2.7
15
85
7
57
38
2
2
57
1.25
25159--25245
20
4.2
21
82
11
99
57
11
0
31
1.34
26760--27697
304
3.1
299
80
5
950
35
15
10
37
1.83
27942--27990
26
1.9
25
87
4
71
24
10
6
59
1.53
30751--30795
24
2.0
22
82
8
54
53
0
2
44
1.13
30849--30882
14
2.5
14
85
4
52
70
0
0
29
0.87
32219--32684
44
10.6
45
74
9
304
27
22
20
30
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32309--32591
87
3.3
85
73
11
304
27
22
19
29
1.98
32309--32640
87
3.8
87
72
11
270
27
22
19
30
1.98
32253--32688
174
2.5
175
93
0
721
26
22
20
30
1.98
33852--33878
1
27.0
1
100
0
54
0
0
0
100
0.00

Tables:   1

The End!