Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2050
Parameters: 2 7 7 80 10 50 1000
Length:  46660

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6164--6301
39
3.6
37
81
8
145
24
28
23
23
2.00
9805--10025
40
5.7
40
80
8
231
25
21
27
25
1.99
9805--10023
79
2.8
78
80
5
237
25
21
27
25
1.99
9884--10058
79
2.3
78
82
5
194
25
21
28
24
1.99
17765--17936
79
2.2
78
83
7
213
25
22
28
24
1.99
17712--17934
40
5.6
39
79
7
207
25
21
27
24
1.99
17792--17969
79
2.2
80
82
3
200
25
22
28
23
1.99
23310--23335
8
3.2
8
100
0
52
11
0
50
38
1.39
25221--25337
41
3.1
41
73
23
146
48
27
0
23
1.56
26984--27037
27
2.0
27
85
0
72
38
7
14
38
1.75
39214--39442
40
5.8
40
92
2
338
26
27
21
23
1.99
39188--39442
79
3.2
79
89
3
336
26
27
21
24
1.99
44303--44350
24
2.0
24
87
4
69
2
0
22
75
0.91
44271--44385
40
2.8
39
79
13
119
2
1
20
74
1.02
44330--44401
20
3.2
20
76
18
63
2
1
19
76
0.99
44288--44380
32
3.0
30
73
16
82
3
2
19
75
1.05
44291--44385
7
12.4
7
72
24
68
3
1
18
76
0.97

Tables:   1

The End!