Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold442
Parameters: 2 7 7 80 10 50 1000
Length:  36049

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2969--3098
25
5.0
26
69
19
74
43
2
1
52
1.23
3026--3141
57
2.1
56
80
9
130
41
1
4
52
1.31
7676--7792
41
2.9
41
84
5
141
40
21
20
17
1.92
7676--7792
40
2.9
40
87
5
155
40
21
20
17
1.92
8601--8770
81
2.1
81
87
1
252
37
14
20
28
1.92
13717--14202
240
2.0
241
95
0
866
34
16
14
34
1.90
14382--14509
9
13.6
9
76
9
112
47
20
0
31
1.56
14399--14476
39
2.0
39
94
0
138
47
20
0
32
1.51
14395--14507
57
2.0
57
87
0
163
46
22
0
30
1.58
17225--17336
54
2.1
54
100
0
224
37
10
18
33
1.86
20101--20144
21
2.1
21
95
0
79
25
20
54
0
1.45
20442--20593
43
3.5
43
92
0
250
21
19
28
30
1.97
20567--20621
28
2.0
28
92
0
92
20
14
27
38
1.91
20524--20664
71
2.0
71
95
0
255
19
18
28
33
1.96
20481--20707
114
2.0
114
92
0
373
19
18
29
32
1.96
20442--20752
157
2.0
158
90
0
489
20
18
28
32
1.96
20595--20786
43
4.4
43
91
1
312
18
19
27
34
1.95
28762--29024
40
6.6
40
87
3
316
24
20
28
26
1.99
28801--29059
80
3.3
80
84
3
238
25
20
28
25
1.99

Tables:   1

The End!