Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3821
Parameters: 2 7 7 80 10 50 1000
Length:  14652

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2043--2117
22
3.3
22
66
20
64
26
32
10
30
1.90
1832--2232
46
8.6
47
88
6
559
28
29
7
34
1.85
3483--3661
85
2.1
85
98
0
349
26
27
8
37
1.85
4902--5250
40
8.9
40
90
2
514
25
27
21
24
1.99
4902--5250
78
4.4
80
89
3
514
25
27
21
24
1.99
5302--5376
38
2.0
38
86
5
107
24
26
18
30
1.98
7816--8359
47
11.8
47
90
5
828
26
30
10
32
1.90
8237--8356
22
5.3
22
64
18
75
27
30
10
31
1.89
8275--8435
77
2.1
78
91
6
274
26
29
9
33
1.89
8322--8396
31
2.3
31
86
6
105
26
32
10
30
1.90
7796--8549
324
2.4
315
87
8
1072
27
29
9
33
1.88
8361--8549
48
4.0
47
95
4
326
29
27
8
34
1.86
8229--8483
124
2.0
122
89
8
397
27
29
9
32
1.88
8361--8549
97
2.0
94
93
5
326
29
27
8
34
1.86
9811--9989
85
2.1
85
98
0
349
26
27
8
37
1.85
11233--11587
40
9.1
40
91
3
535
25
28
21
24
1.99
11233--11587
79
4.5
79
90
3
531
25
28
21
24
1.99
11233--11587
119
3.0
120
92
3
571
25
28
21
24
1.99
14130--14373
47
5.2
47
94
1
375
26
31
9
32
1.89
14305--14448
75
1.9
74
91
5
238
25
30
12
31
1.93

Tables:   1

The End!