Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold606
Parameters: 2 7 7 80 10 50 1000
Length:  26085

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3337--3381
14
3.3
14
84
6
65
48
13
0
37
1.42
4525--4621
30
3.2
30
70
8
81
27
27
16
27
1.97
6335--6364
10
3.0
10
90
0
51
66
10
3
20
1.35
7307--7363
11
5.5
10
73
22
55
77
1
17
3
1.00
7296--7363
21
3.2
20
80
12
66
76
2
17
2
1.04
7307--7363
5
11.0
5
77
17
55
77
1
17
3
1.00
7307--7363
16
3.7
14
80
17
60
77
1
17
3
1.00
7411--7440
11
2.6
12
89
10
53
43
13
16
26
1.85
7415--7442
11
2.5
11
100
0
56
42
17
17
21
1.89
7443--7467
12
2.1
12
100
0
50
76
0
16
8
1.02
7437--7492
18
3.1
18
76
5
51
69
3
19
7
1.27
7443--7524
30
2.7
31
81
5
105
64
1
21
12
1.33
10158--10191
9
3.8
9
88
0
50
70
11
8
8
1.34
21666--21719
24
2.2
25
78
15
60
11
22
3
62
1.43
23188--23238
11
4.1
13
78
17
54
11
9
5
72
1.27
23193--23267
12
5.8
13
71
25
61
13
10
2
73
1.20

Tables:   1

The End!