Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2284
Parameters: 2 7 7 80 10 50 1000
Length:  42491

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
47--201
81
1.9
81
85
5
215
27
15
27
29
1.96
46--222
27
6.6
27
80
7
171
27
15
27
29
1.96
43--222
81
2.2
81
81
3
211
27
15
27
30
1.96
8131--8308
27
6.6
27
83
3
205
26
15
28
29
1.96
8132--8287
82
1.9
81
88
3
233
26
15
28
29
1.96
8128--8308
82
2.2
81
83
2
229
27
15
27
29
1.96
20331--20394
28
2.3
28
86
0
92
18
15
37
28
1.92
20711--21168
53
8.6
52
87
3
594
39
18
10
31
1.85
20711--21259
106
5.2
105
82
5
606
39
18
10
31
1.84
20711--21222
159
3.2
159
85
3
654
39
18
9
31
1.84
21107--21233
27
4.7
27
77
1
105
41
20
7
30
1.79
21213--21301
27
3.3
27
80
3
99
37
16
16
29
1.92
21107--21255
81
1.8
81
80
8
178
41
18
8
30
1.81
28741--28771
13
2.5
12
90
10
53
22
19
0
58
1.40
29916--29944
12
2.3
13
94
5
51
48
6
0
44
1.29
34354--34532
85
2.1
85
100
0
358
37
8
27
26
1.85
35702--35883
40
4.6
40
82
9
203
24
21
28
25
1.99
35752--35906
79
2.0
79
84
7
208
25
21
27
25
1.99

Tables:   1

The End!