Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1818
Parameters: 2 7 7 80 10 50 1000
Length:  26449

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3143--3272
25
5.0
26
69
19
74
43
2
1
52
1.23
3200--3315
57
2.1
56
80
9
130
41
1
4
52
1.31
7851--7966
41
2.9
40
86
6
146
39
21
20
18
1.92
8776--8936
78
2.1
78
88
4
236
36
15
20
27
1.93
14540--14706
9
17.6
9
76
10
145
47
20
0
31
1.55
14551--14707
48
3.3
47
79
3
170
46
21
0
31
1.56
14557--14673
39
3.0
39
97
0
216
47
21
0
31
1.51
14540--14704
57
2.9
57
82
7
183
47
21
0
30
1.55
14540--14691
39
4.1
37
89
6
193
47
21
0
30
1.56
20242--20285
21
2.1
21
91
4
72
27
18
54
0
1.44
20579--20722
43
3.4
42
86
1
189
19
19
26
34
1.96
20869--21025
41
3.8
40
84
5
197
27
18
26
27
1.98
20869--21026
82
1.9
83
85
1
219
27
18
26
27
1.99
21065--21136
37
1.9
37
85
0
99
45
33
0
20
1.52
21249--21311
7
9.0
7
74
6
56
23
3
25
47
1.66
21249--21310
14
4.4
14
76
8
63
22
3
25
48
1.66
21904--22016
7
16.0
7
89
4
102
65
0
0
33
0.99
21953--21991
13
2.9
13
96
3
69
84
0
0
15
0.62
22076--22116
19
2.2
18
91
4
64
75
0
2
21
0.92
26070--26320
42
6.0
41
82
8
296
23
21
29
25
1.99
26070--26320
82
3.0
83
82
8
298
23
21
29
25
1.99

Tables:   1

The End!