Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1038
Parameters: 2 7 7 80 10 50 1000
Length:  49617

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2580--2763
40
4.6
40
85
2
262
25
23
27
23
2.00
10596--10780
40
4.6
40
80
3
219
24
22
27
24
2.00
13010--13047
20
1.9
20
84
10
51
23
23
0
52
1.47
14254--14368
45
2.5
45
85
2
140
42
12
21
23
1.86
15047--15071
13
1.9
13
100
0
50
64
4
0
32
1.12
15037--15085
22
2.2
21
82
10
62
69
2
2
26
1.10
16612--16671
22
2.7
22
78
0
66
31
18
25
25
1.97
17030--17091
27
2.3
27
91
5
99
30
14
16
38
1.88
18542--18581
18
2.2
18
90
0
62
40
15
20
25
1.90
18733--18830
41
2.4
41
91
0
160
23
21
26
28
1.99
21105--21235
40
3.3
41
72
9
101
24
19
26
29
1.98
39172--39262
41
2.2
41
100
0
182
30
16
20
31
1.95
42358--42577
38
5.6
39
73
17
145
24
28
22
24
1.99

Tables:   1

The End!