Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2708
Parameters: 2 7 7 80 10 50 1000
Length:  42272

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
832--1065
47
4.9
48
89
7
329
28
30
8
32
1.87
4721--5103
40
9.6
40
89
0
550
26
27
21
24
1.99
6484--6719
47
4.9
49
92
3
367
28
30
8
32
1.87
10485--10530
24
1.9
24
86
0
65
17
17
4
60
1.51
10713--10849
40
3.5
39
68
22
108
33
27
17
21
1.96
10672--10876
76
2.7
76
83
1
241
31
24
18
25
1.98
14243--14274
16
2.1
15
94
5
55
3
18
6
71
1.20
22333--22363
16
1.9
16
93
0
53
87
0
9
3
0.66
22326--22367
18
2.4
17
81
18
50
83
0
11
4
0.79
25418--25502
25
3.4
25
77
6
75
27
23
23
25
2.00
27857--27892
19
1.9
19
88
5
56
44
0
11
44
1.39
40189--40224
19
1.9
19
88
5
56
44
11
0
44
1.39

Tables:   1

The End!