Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold323
Parameters: 2 7 7 80 10 50 1000
Length:  39576

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2585--2619
18
2.0
18
88
5
54
22
25
0
51
1.48
5839--5954
50
2.3
52
86
5
157
32
15
12
38
1.86
12479--12573
47
2.0
48
91
2
156
22
17
14
45
1.85
22884--22938
20
2.8
20
80
0
65
52
10
5
30
1.59
31357--31381
12
2.1
12
100
0
50
32
8
16
44
1.76
32833--32872
20
2.0
20
90
0
62
32
12
27
27
1.93
32833--32904
20
3.7
20
76
9
58
37
12
27
22
1.90
32877--32915
11
3.9
10
83
10
53
48
17
23
10
1.78
32876--32914
19
2.0
20
95
5
71
46
17
25
10
1.80
35221--35290
25
2.7
26
73
6
61
34
5
10
50
1.60
35253--35307
20
2.8
20
75
10
58
32
5
10
50
1.60
38729--38785
19
2.8
20
77
17
64
70
1
21
7
1.20
38742--38790
25
2.0
25
84
8
64
71
2
20
6
1.18

Tables:   1

The End!