Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1361
Parameters: 2 7 7 80 10 50 1000
Length:  31415

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
65--292
46
5.0
46
91
2
325
23
23
14
38
1.92
49--291
90
2.7
91
88
1
344
23
23
13
39
1.90
2342--2380
16
2.4
16
91
0
60
0
30
0
69
0.89
2572--2623
25
2.1
25
86
13
72
59
1
1
36
1.19
4366--4471
52
2.0
53
90
5
171
27
7
6
58
1.50
6076--6180
18
5.6
18
74
14
88
36
15
12
36
1.85
8273--8365
40
2.3
41
78
12
113
39
22
7
30
1.82
9946--9978
17
2.0
17
94
5
59
36
15
0
48
1.45
10259--10566
46
6.7
46
88
2
406
19
23
14
42
1.88
12346--12393
11
4.2
11
79
10
60
64
0
0
35
0.94
12340--12395
24
2.3
24
87
3
76
60
1
0
37
1.07
15666--15697
3
10.7
3
100
0
64
0
65
0
34
0.93
18917--18961
11
3.9
11
80
11
54
57
4
2
35
1.31

Tables:   1

The End!