Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3193
Parameters: 2 7 7 80 10 50 1000
Length:  26735

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5597--5627
10
3.0
10
90
9
53
70
9
0
19
1.14
5600--5628
11
2.6
11
100
0
58
79
6
0
13
0.93
5679--5730
15
3.4
15
97
2
95
63
5
11
19
1.47
5679--5730
16
3.3
16
94
2
88
63
5
11
19
1.47
15631--15670
18
2.2
18
86
4
53
12
27
0
60
1.33
16724--16777
14
3.9
14
88
11
85
22
12
0
64
1.27
16724--16777
27
1.9
29
92
7
94
22
12
0
64
1.27
16815--16847
13
2.6
13
90
4
50
9
3
9
78
1.05
16813--16851
12
3.2
12
85
3
51
12
5
15
66
1.41
18646--18800
79
2.0
79
100
0
310
20
3
21
54
1.60
19004--19104
52
1.9
52
93
0
175
33
21
17
26
1.96
25333--25433
52
1.9
52
95
0
184
32
21
18
26
1.97

Tables:   1

The End!