Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1554
Parameters: 2 7 7 80 10 50 1000
Length:  40670

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
708--739
2
16.0
2
100
0
64
0
50
0
50
1.00
20066--20623
250
2.3
241
91
2
882
29
23
17
30
1.96
20155--20623
125
3.7
125
88
2
708
29
23
16
30
1.96
31306--31347
20
2.1
21
78
13
52
0
61
0
38
0.96
31305--31365
26
2.5
25
76
10
63
0
59
0
40
0.98
31813--31872
3
19.3
3
76
6
57
31
1
6
60
1.33
31814--31875
23
2.8
22
87
4
81
32
1
8
58
1.37
31838--31883
23
2.0
23
82
0
56
30
4
10
54
1.55
32186--32277
20
4.7
19
71
16
57
38
3
2
56
1.28
32284--32344
29
2.1
30
82
11
74
32
4
6
55
1.47
32668--32768
36
2.8
36
77
5
107
36
11
0
50
1.46

Tables:   1

The End!