Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3515
Parameters: 2 7 7 80 10 50 1000
Length:  19823

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
131--161
16
1.9
16
93
0
53
51
3
0
45
1.17
636--685
22
2.3
22
100
0
100
28
32
0
40
1.57
653--767
51
2.3
50
92
4
196
29
28
0
41
1.56
767--831
29
2.2
30
91
2
105
33
0
0
66
0.92
1899--1923
7
3.6
7
100
0
50
28
0
12
60
1.32
2994--3179
25
7.7
25
64
22
85
38
3
14
44
1.62
2992--3176
71
2.6
71
95
0
334
37
3
14
44
1.62
3178--3345
28
6.2
28
83
12
203
47
27
0
25
1.57
3229--3269
20
2.0
20
90
0
64
43
29
0
26
1.55
3187--3333
78
1.9
79
90
7
237
47
26
0
25
1.52
3343--3524
55
3.3
55
96
2
330
37
11
4
45
1.62
6622--6969
123
2.8
124
95
2
630
31
22
15
29
1.95
9249--9287
20
2.0
20
89
0
60
38
0
10
51
1.36
10189--10220
15
2.1
16
94
5
57
71
0
0
28
0.86
14145--14193
3
17.3
3
75
12
50
32
2
4
61
1.26
14149--14199
15
3.1
17
75
16
54
33
3
5
56
1.42
14167--14218
21
2.5
20
78
9
52
30
9
5
53
1.57
14314--14353
3
13.0
3
89
5
62
32
0
2
65
1.06

Tables:   1

The End!