Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold604
Parameters: 2 7 7 80 10 50 1000
Length:  40788

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14--246
47
5.0
46
87
6
308
32
8
30
29
1.87
14--246
93
2.5
94
88
5
328
32
8
30
29
1.87
1612--2003
118
3.3
118
89
3
558
24
21
28
26
1.99
1604--1990
158
2.5
157
89
2
589
24
20
27
26
1.99
1612--1990
40
9.6
40
90
2
559
24
21
27
26
1.99
5639--5874
47
4.9
49
92
3
367
32
8
30
28
1.87
7250--7682
119
3.6
119
89
2
638
24
21
27
26
1.99
7250--7669
40
10.6
40
90
1
621
24
21
27
26
1.99
7264--7682
159
2.6
159
90
1
502
24
20
28
26
1.99
11263--11933
47
13.9
49
93
4
1145
32
8
29
29
1.86
11263--11933
96
7.0
97
95
2
1130
32
8
29
29
1.86
16290--16336
22
2.1
22
88
0
67
34
25
25
14
1.94
17379--17462
32
2.6
32
81
5
98
23
28
34
13
1.92
17675--17711
12
3.0
13
88
7
51
13
10
16
59
1.61
27541--27586
24
1.9
24
82
8
58
30
30
15
23
1.95
30268--30412
40
3.6
40
85
4
193
25
24
26
23
2.00
37040--37114
37
2.0
38
97
2
143
32
12
24
32
1.91

Tables:   1

The End!